Retrieval from the Database of Pre-calcuated Genotyping/Subtyping Results

Virus: HIV-1 / Sequence Type: Nucleotide Multiple Substitution Correction Algorithm: Jukes-Cantor All sites that include gaps were deleted. Gene by Gene Subtype Prediction Summary (Download as an EXCEL file) NCBI GI ACCESSION Gene Start Stop Length LANL Subtype Major Subtype Nested Analysis Final Decision 290969 L16594 env 0 105 58 B C Undecided 290971 L16620 env 0 105 58 B C Undecided 290981 L16619 env 0 105 58 B C Undecided 291214 L16607 env 0 111 58 G B Undecided 327777 AH003604 5tat 1897 1960 57 ? D B Undecided 328595 L06697 env 0 105 58 B C Undecided 328987 M61455 env 0 102 57 B G Undecided 329031 M61483 env 0 100 53 B B Undecided 345304 Z15182 env 0 105 58 C B Undecided 415100 L21785 env 0 105 58 C 15_01B Undecided 415102 L21770 env 0 105 58 C B Undecided 415122 L21782 env 0 105 58 C B Undecided 415128 L21787 env 0 105 58 C B Undecided 415130 L21786 env 0 105 58 C B Undecided 415132 L21788 env 0 105 58 C B Undecided 415134 L21771 env 0 105 58 C B Undecided 415138 L21776 env 0 105 58 C B Undecided 415140 L21831 env 0 105 58 C B Undecided 415142 L21781 env 0 105 58 C B Undecided 415144 L21832 env 0 105 58 C B Undecided 415146 L21833 env 0 105 58 C B Undecided 415152 L21834 env 0 105 58 C B Undecided 415158 L21800 env 0 105 58 C B Undecided 415162 L21836 env 0 105 58 C B Undecided 415166 L21790 env 0 105 58 C B Undecided 415172 L21808 env 0 105 58 C B Undecided 415176 L21801 env 0 105 58 C B Undecided 415184 L21795 env 0 105 58 C B Undecided 415190 L21805 env 0 105 58 C B Undecided 415194 L21806 env 0 105 58 C B Undecided 415204 L21818 env 0 105 58 C B Undecided 415206 L21814 env 0 105 58 C B Undecided 415208 L21817 env 0 105 58 C B Undecided 415218 L21819 env 0 105 58 C B Undecided 415226 L21824 env 0 105 58 C B Undecided 505807 U10714 env 0 105 58 B G Undecided 505809 U10715 env 0 105 58 B G Undecided 505839 U10730 env 0 105 58 G G Undecided 505841 U10731 env 0 105 58 B G Undecided 505843 U10732 env 0 105 58 B G Undecided 505847 U10734 env 0 105 58 B G Undecided 505879 U10750 env 0 105 58 C G Undecided 505994 U10768 env 0 105 58 G G Undecided 506008 U10775 env 0 105 58 B C Undecided 506036 U10789 env 0 105 58 C G Undecided 506040 U10791 env 0 105 58 G G Undecided 506042 U10792 env 0 105 58 B G Undecided 506044 U10793 env 0 105 58 B G Undecided 506088 U10815 env 0 105 58 B G Undecided 506094 U10818 env 0 105 58 G 06_cpx Undecided 506096 U10819 env 0 105 58 G 06_cpx Undecided 506116 U10829 env 0 105 58 B G Undecided 506118 U10830 env 0 105 58 B G Undecided 506120 U10831 env 0 105 58 B G Undecided 506122 U10832 env 0 105 58 B G Undecided 506124 U10833 env 0 105 58 B G Undecided 506134 U10838 env 0 105 58 B G Undecided 506136 U10839 env 0 105 58 B G Undecided 506140 U10840 env 0 105 58 B G Undecided 509846 L34435 env 0 105 58 C B Undecided 509930 L34455 env 0 105 58 C B Undecided 1621362 U70806 env 0 102 57 F B Undecided 1621392 U70821 env 0 102 57 B C Undecided 1667405 U70597 env 0 102 57 B C Undecided 1667407 U70598 env 0 102 57 B C Undecided 1667409 U70599 env 0 102 57 B C Undecided 1667411 U70600 env 0 102 57 A C Undecided 1667441 U70615 env 0 108 57 D 05_DF Undecided 2072812 U81247 env 0 113 63 B C Undecided 2505913 AJ001749 env 4 109 90 A B Undecided 4324547 AF106177 gag 0 190 159 B D Undecided 6577086 AB020925 pol 0 299 233 D B Undecided 8272524 AF221019 pol 0 297 231 F B Undecided 8918542 AB037019 env 0 102 57 B C Undecided 8918550 AB037020 env 0 102 57 B C Undecided 15485759 AJ412949 pol 9 297 222 01_AE A Undecided 18656668 AF451379 env 0 105 58 B 06_cpx Undecided 19421924 AF406710 pol 0 297 231 F D Undecided 19421942 AF406719 pol 0 297 231 01_AE A Undecided 19421948 AF406722 pol 0 297 231 F D Undecided 19421952 AF406724 pol 0 297 231 A D Undecided 19421960 AF406728 pol 0 297 231 B D Undecided 28274132 AY182828 pol 0 297 231 B 12_BF Undecided 30143704 AY243308 env 0 345 212 F B Undecided 32185300 AY213201 pol 4 297 227 D B Undecided 32185849 AY213485 pol 0 571 516 B 07_BC Undecided 33391570 AY335369 pol 0 285 219 B D Undecided 33391646 AY335407 pol 0 288 222 F B Undecided 34786283 AJ554795 env 0 535 301 F H Undecided 34786509 AJ554908 env 0 636 376 H H Undecided 37140435 AY305425 env 0 105 58 B C Undecided 37362853 AY387832 env 0 105 58 C B Undecided 37362859 AY387835 env 0 105 58 C B Undecided 37362889 AY387850 env 0 105 58 C B Undecided 37693951 AY194030 5tat 0 144 124 H B Undecided 37693963 AY194036 5tat 0 144 124 K 16_A2D Undecided 37701691 AY397337 pol 0 499 406 01_AE A Undecided 37720783 AY125447 gag 0 265 243 ? D 16_A2D Undecided 37720789 AY125450 gag 0 265 243 ? 01_AE 01_AE Undecided 37720804 AY125458 gag 0 265 243 ? D 16_A2D Undecided

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