Retrieval from the Database of Pre-calcuated Genotyping/Subtyping Results

Virus: HIV-1 / Sequence Type: Nucleotide Multiple Substitution Correction Algorithm: Jukes-Cantor All sites that include gaps were deleted. Gene by Gene Subtype Prediction Summary (Download as an EXCEL file) NCBI GI ACCESSION Gene Start Stop Length LANL Subtype Major Subtype Nested Analysis Final Decision 290969 L16594 env 0 105 58 B C Undecided 290971 L16620 env 0 105 58 B C Undecided 290981 L16619 env 0 105 58 B C Undecided 291214 L16607 env 0 111 58 G B Undecided 305530 L11500 env 1 287 158 G F 06_cpx Undecided 327352 M73478 pol 2 177 77 D G 11_cpx Undecided 327776 M21138 5tat 0 63 57 B D B Undecided 327777 AH003604 5tat 1897 1960 57 ? D B Undecided 328595 L06697 env 0 105 58 B C Undecided 328987 M61455 env 0 102 57 B G Undecided 329031 M61483 env 0 100 53 B B Undecided 345304 Z15182 env 0 105 58 C B Undecided 415100 L21785 env 0 105 58 C 15_01B Undecided 415102 L21770 env 0 105 58 C B Undecided 415122 L21782 env 0 105 58 C B Undecided 415128 L21787 env 0 105 58 C B Undecided 415130 L21786 env 0 105 58 C B Undecided 415132 L21788 env 0 105 58 C B Undecided 415134 L21771 env 0 105 58 C B Undecided 415138 L21776 env 0 105 58 C B Undecided 415140 L21831 env 0 105 58 C B Undecided 415142 L21781 env 0 105 58 C B Undecided 415144 L21832 env 0 105 58 C B Undecided 415146 L21833 env 0 105 58 C B Undecided 415152 L21834 env 0 105 58 C B Undecided 415158 L21800 env 0 105 58 C B Undecided 415162 L21836 env 0 105 58 C B Undecided 415166 L21790 env 0 105 58 C B Undecided 415172 L21808 env 0 105 58 C B Undecided 415176 L21801 env 0 105 58 C B Undecided 415184 L21795 env 0 105 58 C B Undecided 415190 L21805 env 0 105 58 C B Undecided 415194 L21806 env 0 105 58 C B Undecided 415204 L21818 env 0 105 58 C B Undecided 415206 L21814 env 0 105 58 C B Undecided 415208 L21817 env 0 105 58 C B Undecided 415218 L21819 env 0 105 58 C B Undecided 415226 L21824 env 0 105 58 C B Undecided 487349 U08953 env 0 282 168 BF F 12_BF Undecided 505807 U10714 env 0 105 58 B G Undecided 505809 U10715 env 0 105 58 B G Undecided 505839 U10730 env 0 105 58 G G Undecided 505841 U10731 env 0 105 58 B G Undecided 505843 U10732 env 0 105 58 B G Undecided 505847 U10734 env 0 105 58 B G Undecided 505879 U10750 env 0 105 58 C G Undecided 505994 U10768 env 0 105 58 G G Undecided 506008 U10775 env 0 105 58 B C Undecided 506036 U10789 env 0 105 58 C G Undecided 506040 U10791 env 0 105 58 G G Undecided 506042 U10792 env 0 105 58 B G Undecided 506044 U10793 env 0 105 58 B G Undecided 506088 U10815 env 0 105 58 B G Undecided 506094 U10818 env 0 105 58 G 06_cpx Undecided 506096 U10819 env 0 105 58 G 06_cpx Undecided 506116 U10829 env 0 105 58 B G Undecided 506118 U10830 env 0 105 58 B G Undecided 506120 U10831 env 0 105 58 B G Undecided 506122 U10832 env 0 105 58 B G Undecided 506124 U10833 env 0 105 58 B G Undecided 506134 U10838 env 0 105 58 B G Undecided 506136 U10839 env 0 105 58 B G Undecided 506140 U10840 env 0 105 58 B G Undecided 509846 L34435 env 0 105 58 C B Undecided 509930 L34455 env 0 105 58 C B Undecided 632619 U19445 gag 0 311 298 F1 F 12_BF Undecided 632641 U19456 gag 0 311 298 F1 B 07_BC Undecided 699564 U21106 gag 0 289 265 D D B Undecided 924316 U13457 env 0 279 138 A C A Undecided 924318 U13458 env 0 279 138 C K C Undecided 924324 U13461 env 0 276 138 C K C Undecided 924326 U13462 env 0 279 138 C K C Undecided 1144357 U33096 env 0 105 58 G B G Undecided 1144377 U33106 env 0 102 55 H G 13_cpx Undecided 1226092 L76880 env 0 270 163 G K G Undecided 1226146 L76908 env 0 270 163 C F 12_BF Undecided 1469600 U53633 pol 0 297 231 B B D Undecided 1495967 U27419 nef 2556 2842 102 D B 07_BC Undecided 1527024 U59570 env 0 326 206 02_AG B 02_AG Undecided 1575640 U69658 env 0 258 160 A F A Undecided 1621362 U70806 env 0 102 57 F B Undecided 1621392 U70821 env 0 102 57 B C Undecided 1622740 U45483 env 0 114 61 C B C Undecided 1622768 U45497 env 0 119 63 C B C Undecided 1622774 U45500 env 0 201 112 C F C Undecided 1667405 U70597 env 0 102 57 B C Undecided 1667407 U70598 env 0 102 57 B C Undecided 1667409 U70599 env 0 102 57 B C Undecided 1667411 U70600 env 0 102 57 A C Undecided 1667441 U70615 env 0 108 57 D 05_DF Undecided 1763505 U76177 env 0 360 235 D J J Undecided 1894988 U86550 gag 0 728 558 AC C 10_CD Undecided 1899108 U86774 5rev 13 85 59 A2C C A Undecided 1899114 U86775 5rev 72 144 59 A2C C A Undecided 2072812 U81247 env 0 113 63 B C Undecided 2290099 U84845 nef 2574 2857 102 B D B Undecided 2462337 Y14358 env 6 281 163 06_cpx F G Undecided 2505913 AJ001749 env 4 109 90 A B Undecided 2585985 AF024025 gag 0 290 91 B B D Undecided 2586838 AF025743 pol 0 297 231 U D 09_cpx Undecided

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